Trans-eQTLs across different cancer types
In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
Gene symbol
|
Gene position (hg19)
|
p-valule
|
|||
|---|---|---|---|---|---|---|---|---|---|
| THCA | rs62505577 | chr8:3286022 | A/G | CSMD1 | chr8:2792875-4852494:- | -0.5 | -5.97 | 4.74E-9 | Box Plot |
| THCA | rs62505578 | chr8:3286278 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.5 | -5.97 | 4.74E-9 | Box Plot |
| THCA | rs62505579 | chr8:3286414 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.49 | -5.9 | 6.84E-9 | Box Plot |
| THCA | rs62505600 | chr8:3287247 | T/C | CSMD1 | chr8:2792875-4852494:- | -0.49 | -5.92 | 6.1E-9 | Box Plot |
| THCA | rs62505601 | chr8:3287625 | G/A | CSMD1 | chr8:2792875-4852494:- | -0.5 | -5.97 | 4.74E-9 | Box Plot |
| THCA | rs62505603 | chr8:3290628 | C/T | CSMD1 | chr8:2792875-4852494:- | -0.53 | -6.15 | 1.6E-9 | Box Plot |
| THCA | rs62505605 | chr8:3295394 | C/A | CSMD1 | chr8:2792875-4852494:- | -0.51 | -6.01 | 3.59E-9 | Box Plot |
| THCA | rs62555772 | chr9:69075991 | G/A | FAM95B1 | chr9:42466317-42474239:+ | 0.36 | 6.43 | 3.09E-10 | Box Plot |
| THCA | rs62555773 | chr9:69075993 | G/A | FAM95B1 | chr9:42466317-42474239:+ | 0.36 | 6.43 | 3.09E-10 | Box Plot |
| THCA | rs62555834 | chr9:69128280 | C/T | FAM95B1 | chr9:42466317-42474239:+ | 0.36 | 6.42 | 3.23E-10 | Box Plot |
| THCA | rs62555844 | chr9:69143557 | G/A | FAM95B1 | chr9:42466317-42474239:+ | 0.36 | 6.42 | 3.23E-10 | Box Plot |
| THCA | rs62555845 | chr9:69143685 | G/T | FAM95B1 | chr9:42466317-42474239:+ | 0.36 | 6.42 | 3.23E-10 | Box Plot |
| THCA | rs625882 | chr5:176535031 | T/C | LOC388955 | chr2:63849182-63850159:- | -0.85 | -21.32 | 2.18E-71 | Box Plot |
| THCA | rs626014 | chr13:30621646 | C/T | LIN37 | chr19:36239262-36245420:+ | 0.18 | 5.93 | 5.67E-9 | Box Plot |
| THCA | rs628198 | chr11:77651056 | C/T | INTS4L1 | chr7:64601603-64694600:+ | 0.36 | 5.94 | 5.62E-9 | Box Plot |